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tetplko puro vector  (Addgene inc)


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    Structured Review

    Addgene inc tetplko puro vector
    Tetplko Puro Vector, supplied by Addgene inc, used in various techniques. Bioz Stars score: 96/100, based on 703 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/tetplko+puro+vector/Tet-pLKO-puro+(Plasmid+%2321915)/pm41776172-45-6-8
    Average 96 stars, based on 703 article reviews
    tetplko puro vector - by Bioz Stars, 2026-09
    96/100 stars

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    Related Articles

    Knockdown:

    Article Title: KDM5A Inhibits Antitumor Immune Responses Through Downregulation of the Antigen-Presentation Pathway in Ovarian Cancer
    Article Snippet: .. Tet-inducible knockdown of Kdm5a using short hairpin RNA tet-pLKO-shKdm5a was constructed by inserting the sense sequence 50- CCTTTGAGTGACTTAGAGGAA-30 for clone 1 or 50- CAAAGAGAACAAGACGAGTTA-30 for clone 2 into the tetpLKO-puro vector (Addgene, catalog no. 21915) digested with AgeI (New England Biolabs, catalog no. R3552) and EcoRI restriction enzymes (New England Biolabs, catalog no. R3010) and dephosphorylated for 30minutes at 37 C. The digested plasmid was run on a 1% agarose gel, cut out, and purified using the Wizard SV Gel and PCR Clean Up kit (Promega, catalog no. A9281). .. The oligonucleotides were phosphorylated using T4 PNK (New England Biolabs, catalog no. M0201S) with T4 Ligation Buffer (New England Biolabs, catalog no. B0202S).

    Article Title: DDX23 is a Metabolic Regulator in Hepatocellular Carcinoma
    Article Snippet: Lenti-viruses were produced by co-transfection into HEK293FT cells with the pLKO.1 vectors, packaging plasmid psPAX2 (Addgene plasmid 12260, Addgene, Cambridge, MA) and envelope pMD2.G (Addgene plasmid 12259), using the PEI. .. For the doxycycline (Doxy)-inducible DDX23 knock-down, tetpLKO-puro vector (Addgene #21915) was used. .. Media were changed 16 h after transfection, and cells were further incubated for 48 h. 72 h post-infection, cell debris in the media were removed by centrifugation at 2000 rpm for 10 min and lenti-viruses were concentrated by Lenti-X concentrator (Clonetech, Mountain View, CA).

    Article Title: PHGDH activation fuels glioblastoma progression and radioresistance via serine synthesis pathway.
    Article Snippet: .. For the inducible knockdown experiments conducted in vitro, lentiviral constructs that carried doxycycline (DOX)-inducible shRNAs were generated in the TetpLKO-puro vector (Addgene). ..

    shRNA:

    Article Title: KDM5A Inhibits Antitumor Immune Responses Through Downregulation of the Antigen-Presentation Pathway in Ovarian Cancer
    Article Snippet: .. Tet-inducible knockdown of Kdm5a using short hairpin RNA tet-pLKO-shKdm5a was constructed by inserting the sense sequence 50- CCTTTGAGTGACTTAGAGGAA-30 for clone 1 or 50- CAAAGAGAACAAGACGAGTTA-30 for clone 2 into the tetpLKO-puro vector (Addgene, catalog no. 21915) digested with AgeI (New England Biolabs, catalog no. R3552) and EcoRI restriction enzymes (New England Biolabs, catalog no. R3010) and dephosphorylated for 30minutes at 37 C. The digested plasmid was run on a 1% agarose gel, cut out, and purified using the Wizard SV Gel and PCR Clean Up kit (Promega, catalog no. A9281). .. The oligonucleotides were phosphorylated using T4 PNK (New England Biolabs, catalog no. M0201S) with T4 Ligation Buffer (New England Biolabs, catalog no. B0202S).

    Article Title: A Novel Non-Catalytic Scaffolding Activity of Hexokinase 2 Contributes to EMT and Metastasis
    Article Snippet: .. For the tet-inducible shRNA expression system, each shRNA sequence was inserted into the TetpLKO-puro vector (a gift from Dmitri Wiederschain; Addgene plasmid #21915). ..

    Article Title: SPINK2 silencing suppresses leukemic proliferation and restores myeloid commitment via MECOM downregulation in acute myeloid leukaemia.
    Article Snippet: For this purpose, we interrogated the GPP Web Portal (https://portals.broadinstitute.org/gpp/public/gene/search_clones) and obtained the shRNA that displayed the highest predicted silencing score: shRNA1, TCAGGGAAGGTGGTCATAATA (TRCN0000373635). .. The shRNA was cloned into the TetpLKO-puro vector (Addgene plasmid #21915) using AgeI/EcoRI restriction sites(26). ..

    Construct:

    Article Title: KDM5A Inhibits Antitumor Immune Responses Through Downregulation of the Antigen-Presentation Pathway in Ovarian Cancer
    Article Snippet: .. Tet-inducible knockdown of Kdm5a using short hairpin RNA tet-pLKO-shKdm5a was constructed by inserting the sense sequence 50- CCTTTGAGTGACTTAGAGGAA-30 for clone 1 or 50- CAAAGAGAACAAGACGAGTTA-30 for clone 2 into the tetpLKO-puro vector (Addgene, catalog no. 21915) digested with AgeI (New England Biolabs, catalog no. R3552) and EcoRI restriction enzymes (New England Biolabs, catalog no. R3010) and dephosphorylated for 30minutes at 37 C. The digested plasmid was run on a 1% agarose gel, cut out, and purified using the Wizard SV Gel and PCR Clean Up kit (Promega, catalog no. A9281). .. The oligonucleotides were phosphorylated using T4 PNK (New England Biolabs, catalog no. M0201S) with T4 Ligation Buffer (New England Biolabs, catalog no. B0202S).

    Article Title: PHGDH activation fuels glioblastoma progression and radioresistance via serine synthesis pathway.
    Article Snippet: .. For the inducible knockdown experiments conducted in vitro, lentiviral constructs that carried doxycycline (DOX)-inducible shRNAs were generated in the TetpLKO-puro vector (Addgene). ..

    Sequencing:

    Article Title: KDM5A Inhibits Antitumor Immune Responses Through Downregulation of the Antigen-Presentation Pathway in Ovarian Cancer
    Article Snippet: .. Tet-inducible knockdown of Kdm5a using short hairpin RNA tet-pLKO-shKdm5a was constructed by inserting the sense sequence 50- CCTTTGAGTGACTTAGAGGAA-30 for clone 1 or 50- CAAAGAGAACAAGACGAGTTA-30 for clone 2 into the tetpLKO-puro vector (Addgene, catalog no. 21915) digested with AgeI (New England Biolabs, catalog no. R3552) and EcoRI restriction enzymes (New England Biolabs, catalog no. R3010) and dephosphorylated for 30minutes at 37 C. The digested plasmid was run on a 1% agarose gel, cut out, and purified using the Wizard SV Gel and PCR Clean Up kit (Promega, catalog no. A9281). .. The oligonucleotides were phosphorylated using T4 PNK (New England Biolabs, catalog no. M0201S) with T4 Ligation Buffer (New England Biolabs, catalog no. B0202S).

    Article Title: A Novel Non-Catalytic Scaffolding Activity of Hexokinase 2 Contributes to EMT and Metastasis
    Article Snippet: .. For the tet-inducible shRNA expression system, each shRNA sequence was inserted into the TetpLKO-puro vector (a gift from Dmitri Wiederschain; Addgene plasmid #21915). ..

    Plasmid Preparation:

    Article Title: KDM5A Inhibits Antitumor Immune Responses Through Downregulation of the Antigen-Presentation Pathway in Ovarian Cancer
    Article Snippet: .. Tet-inducible knockdown of Kdm5a using short hairpin RNA tet-pLKO-shKdm5a was constructed by inserting the sense sequence 50- CCTTTGAGTGACTTAGAGGAA-30 for clone 1 or 50- CAAAGAGAACAAGACGAGTTA-30 for clone 2 into the tetpLKO-puro vector (Addgene, catalog no. 21915) digested with AgeI (New England Biolabs, catalog no. R3552) and EcoRI restriction enzymes (New England Biolabs, catalog no. R3010) and dephosphorylated for 30minutes at 37 C. The digested plasmid was run on a 1% agarose gel, cut out, and purified using the Wizard SV Gel and PCR Clean Up kit (Promega, catalog no. A9281). .. The oligonucleotides were phosphorylated using T4 PNK (New England Biolabs, catalog no. M0201S) with T4 Ligation Buffer (New England Biolabs, catalog no. B0202S).

    Article Title: DDX23 is a Metabolic Regulator in Hepatocellular Carcinoma
    Article Snippet: Lenti-viruses were produced by co-transfection into HEK293FT cells with the pLKO.1 vectors, packaging plasmid psPAX2 (Addgene plasmid 12260, Addgene, Cambridge, MA) and envelope pMD2.G (Addgene plasmid 12259), using the PEI. .. For the doxycycline (Doxy)-inducible DDX23 knock-down, tetpLKO-puro vector (Addgene #21915) was used. .. Media were changed 16 h after transfection, and cells were further incubated for 48 h. 72 h post-infection, cell debris in the media were removed by centrifugation at 2000 rpm for 10 min and lenti-viruses were concentrated by Lenti-X concentrator (Clonetech, Mountain View, CA).

    Article Title: A Novel Non-Catalytic Scaffolding Activity of Hexokinase 2 Contributes to EMT and Metastasis
    Article Snippet: .. For the tet-inducible shRNA expression system, each shRNA sequence was inserted into the TetpLKO-puro vector (a gift from Dmitri Wiederschain; Addgene plasmid #21915). ..

    Article Title: SPINK2 silencing suppresses leukemic proliferation and restores myeloid commitment via MECOM downregulation in acute myeloid leukaemia.
    Article Snippet: For this purpose, we interrogated the GPP Web Portal (https://portals.broadinstitute.org/gpp/public/gene/search_clones) and obtained the shRNA that displayed the highest predicted silencing score: shRNA1, TCAGGGAAGGTGGTCATAATA (TRCN0000373635). .. The shRNA was cloned into the TetpLKO-puro vector (Addgene plasmid #21915) using AgeI/EcoRI restriction sites(26). ..

    Article Title: PHGDH activation fuels glioblastoma progression and radioresistance via serine synthesis pathway.
    Article Snippet: .. For the inducible knockdown experiments conducted in vitro, lentiviral constructs that carried doxycycline (DOX)-inducible shRNAs were generated in the TetpLKO-puro vector (Addgene). ..

    Article Title: Tumor Suppressor Folliculin Regulates mTORC1 through Primary Cilia
    Article Snippet: Anti-gamma-tubulin (Cat# T5326) and acetylated-tubulin (Cat# T7451) antibodies were from Sigma and anti-IFT88 antibody (Cat#13967-1-AP) from Proteintech Group Inc. shRNAs and inducible knockdown cell lines—The targeting sequences of the shRNAs are: FLCN (5’- GATGGAGAAGCTCGCTGATTT-3’), IFT88 (5’- GCTTGGAGCCTATTACATTGA-3’), and LKB1 (5’- GCCAACGTGAAGAAGGAAATT-3’). .. The shRNAs were designed and cloned into TetpLKO-Puro vector (Addgene). ..

    Agarose Gel Electrophoresis:

    Article Title: KDM5A Inhibits Antitumor Immune Responses Through Downregulation of the Antigen-Presentation Pathway in Ovarian Cancer
    Article Snippet: .. Tet-inducible knockdown of Kdm5a using short hairpin RNA tet-pLKO-shKdm5a was constructed by inserting the sense sequence 50- CCTTTGAGTGACTTAGAGGAA-30 for clone 1 or 50- CAAAGAGAACAAGACGAGTTA-30 for clone 2 into the tetpLKO-puro vector (Addgene, catalog no. 21915) digested with AgeI (New England Biolabs, catalog no. R3552) and EcoRI restriction enzymes (New England Biolabs, catalog no. R3010) and dephosphorylated for 30minutes at 37 C. The digested plasmid was run on a 1% agarose gel, cut out, and purified using the Wizard SV Gel and PCR Clean Up kit (Promega, catalog no. A9281). .. The oligonucleotides were phosphorylated using T4 PNK (New England Biolabs, catalog no. M0201S) with T4 Ligation Buffer (New England Biolabs, catalog no. B0202S).

    Purification:

    Article Title: KDM5A Inhibits Antitumor Immune Responses Through Downregulation of the Antigen-Presentation Pathway in Ovarian Cancer
    Article Snippet: .. Tet-inducible knockdown of Kdm5a using short hairpin RNA tet-pLKO-shKdm5a was constructed by inserting the sense sequence 50- CCTTTGAGTGACTTAGAGGAA-30 for clone 1 or 50- CAAAGAGAACAAGACGAGTTA-30 for clone 2 into the tetpLKO-puro vector (Addgene, catalog no. 21915) digested with AgeI (New England Biolabs, catalog no. R3552) and EcoRI restriction enzymes (New England Biolabs, catalog no. R3010) and dephosphorylated for 30minutes at 37 C. The digested plasmid was run on a 1% agarose gel, cut out, and purified using the Wizard SV Gel and PCR Clean Up kit (Promega, catalog no. A9281). .. The oligonucleotides were phosphorylated using T4 PNK (New England Biolabs, catalog no. M0201S) with T4 Ligation Buffer (New England Biolabs, catalog no. B0202S).

    Polymerase Chain Reaction:

    Article Title: KDM5A Inhibits Antitumor Immune Responses Through Downregulation of the Antigen-Presentation Pathway in Ovarian Cancer
    Article Snippet: .. Tet-inducible knockdown of Kdm5a using short hairpin RNA tet-pLKO-shKdm5a was constructed by inserting the sense sequence 50- CCTTTGAGTGACTTAGAGGAA-30 for clone 1 or 50- CAAAGAGAACAAGACGAGTTA-30 for clone 2 into the tetpLKO-puro vector (Addgene, catalog no. 21915) digested with AgeI (New England Biolabs, catalog no. R3552) and EcoRI restriction enzymes (New England Biolabs, catalog no. R3010) and dephosphorylated for 30minutes at 37 C. The digested plasmid was run on a 1% agarose gel, cut out, and purified using the Wizard SV Gel and PCR Clean Up kit (Promega, catalog no. A9281). .. The oligonucleotides were phosphorylated using T4 PNK (New England Biolabs, catalog no. M0201S) with T4 Ligation Buffer (New England Biolabs, catalog no. B0202S).

    Clone Assay:

    Article Title: SPINK2 silencing suppresses leukemic proliferation and restores myeloid commitment via MECOM downregulation in acute myeloid leukaemia.
    Article Snippet: For this purpose, we interrogated the GPP Web Portal (https://portals.broadinstitute.org/gpp/public/gene/search_clones) and obtained the shRNA that displayed the highest predicted silencing score: shRNA1, TCAGGGAAGGTGGTCATAATA (TRCN0000373635). .. The shRNA was cloned into the TetpLKO-puro vector (Addgene plasmid #21915) using AgeI/EcoRI restriction sites(26). ..

    Article Title: Tumor Suppressor Folliculin Regulates mTORC1 through Primary Cilia
    Article Snippet: Anti-gamma-tubulin (Cat# T5326) and acetylated-tubulin (Cat# T7451) antibodies were from Sigma and anti-IFT88 antibody (Cat#13967-1-AP) from Proteintech Group Inc. shRNAs and inducible knockdown cell lines—The targeting sequences of the shRNAs are: FLCN (5’- GATGGAGAAGCTCGCTGATTT-3’), IFT88 (5’- GCTTGGAGCCTATTACATTGA-3’), and LKB1 (5’- GCCAACGTGAAGAAGGAAATT-3’). .. The shRNAs were designed and cloned into TetpLKO-Puro vector (Addgene). ..

    In Vitro:

    Article Title: PHGDH activation fuels glioblastoma progression and radioresistance via serine synthesis pathway.
    Article Snippet: .. For the inducible knockdown experiments conducted in vitro, lentiviral constructs that carried doxycycline (DOX)-inducible shRNAs were generated in the TetpLKO-puro vector (Addgene). ..

    Generated:

    Article Title: PHGDH activation fuels glioblastoma progression and radioresistance via serine synthesis pathway.
    Article Snippet: .. For the inducible knockdown experiments conducted in vitro, lentiviral constructs that carried doxycycline (DOX)-inducible shRNAs were generated in the TetpLKO-puro vector (Addgene). ..



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